{"id":1532,"date":"2024-10-10T15:25:58","date_gmt":"2024-10-10T13:25:58","guid":{"rendered":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/?p=1532"},"modified":"2024-10-24T16:50:48","modified_gmt":"2024-10-24T14:50:48","slug":"exploring-the-similarities-of-a-large-bank-of-protein-pockets-in-a-perspective-of-multiple-protein-ligand-interactions-prediction","status":"publish","type":"post","link":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/exploring-the-similarities-of-a-large-bank-of-protein-pockets-in-a-perspective-of-multiple-protein-ligand-interactions-prediction\/","title":{"rendered":"Exploring the similarities of a large bank of protein pockets in a perspective of multiple protein-ligand interactions prediction"},"content":{"rendered":"<p>[et_pb_section fb_built=&#8221;1&#8243; _builder_version=&#8221;3.22&#8243;][et_pb_row _builder_version=&#8221;3.22&#8243; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221;][et_pb_column type=&#8221;1_4&#8243; _builder_version=&#8221;3.0.47&#8243;][et_pb_text _builder_version=&#8221;3.22.1&#8243; background_color=&#8221;#072c72&#8243; border_color_all=&#8221;#3255c9&#8243; text_orientation=&#8221;right&#8221; background_layout=&#8221;dark&#8221; custom_padding=&#8221;20px|15px|15px|&#8221; z_index_tablet=&#8221;500&#8243;]<\/p>\n<p><em>2024 <\/em><\/p>\n<p>Master&#8217;s Projects<\/p>\n<p><span data-sheets-root=\"1\">@Biology<\/span><\/p>\n<p>[\/et_pb_text][et_pb_text _builder_version=&#8221;3.22.1&#8243; text_orientation=&#8221;right&#8221; z_index_tablet=&#8221;500&#8243;]<\/p>\n<p>#Drug design in silico<\/p>\n<p>#Protein pocket mining<\/p>\n<p>#Ppocket druggability prediction<\/p>\n<p>\u00a0<\/p>\n<p>[\/et_pb_text][\/et_pb_column][et_pb_column type=&#8221;3_4&#8243; _builder_version=&#8221;3.0.47&#8243;][et_pb_text _builder_version=&#8221;3.22.1&#8243; z_index_tablet=&#8221;500&#8243;]<\/p>\n<h3><strong>Project Summary<\/strong><\/h3>\n<p>With the growing availability of data in the field of drug discovery, AI methods are promising for guiding and accelerating the search process for therapeutic molecules.<\/p>\n<p>One challenge in drug design is to understand and predict the polypharmacology of molecules, i.e. their ability to interact with multiple protein targets.<\/p>\n<p>We are developping an AI model to identify molecules capable of binding to a therapeutic target protein of interest but also to predict the proteins likely to bind the same molecules in order to prevent side effects or &#8220;off-targets&#8221;.<\/p>\n<p>&nbsp;<\/p>\n<h3><strong>Anne-Claude Camproux<br \/><\/strong>anne-claude.Camproux@wordpress-test.app.u-pariscite.fr<\/h3>\n<ul>\n<li>Professor at Universit\u00e9 Paris Cit\u00e9<\/li>\n<\/ul>\n<p><strong>Lea Dufay<\/strong><\/p>\n<p>dufay.lea@gmail.com<\/p>\n<p>[\/et_pb_text][\/et_pb_column][\/et_pb_row][et_pb_row custom_margin=&#8221;120px||&#8221; admin_label=&#8221;Row&#8221; _builder_version=&#8221;3.22.1&#8243; locked=&#8221;off&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;3.22.1&#8243;][et_pb_divider _builder_version=&#8221;3.22.1&#8243;][\/et_pb_divider][et_pb_text admin_label=&#8221;\u00c0 lire aussi&#8221; _builder_version=&#8221;3.22.1&#8243; z_index_tablet=&#8221;500&#8243; locked=&#8221;off&#8221;]<\/p>\n<h2><span class=\"st\">Projects in the same discipline<br \/><\/span><\/h2>\n<p>[\/et_pb_text][et_pb_blog posts_number=&#8221;4&#8243; include_categories=&#8221;33&#8243; show_author=&#8221;off&#8221; show_date=&#8221;off&#8221; show_pagination=&#8221;off&#8221; module_id=&#8221;page_type_blog&#8221; _builder_version=&#8221;3.22.1&#8243; header_level=&#8221;h4&#8243; border_width_bottom_fullwidth=&#8221;1px&#8221; border_color_bottom_fullwidth=&#8221;rgba(51,51,51,0.18)&#8221; custom_padding=&#8221;||50px|&#8221; z_index_tablet=&#8221;500&#8243; locked=&#8221;off&#8221;][\/et_pb_blog][\/et_pb_column][\/et_pb_row][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"<p>2024 Master&#8217;s Projects@Biology #Drug design in silico#Protein pocket mining#Ppocket druggability prediction\u00a0 Project Summary With the growing availability of data in the field of drug discovery, AI methods are promising for guiding and accelerating the search process for therapeutic molecules. One challenge in drug design is to understand and predict the polypharmacology of molecules, i.e. their&hellip; <a class=\"continue\" href=\"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/exploring-the-similarities-of-a-large-bank-of-protein-pockets-in-a-perspective-of-multiple-protein-ligand-interactions-prediction\/\">Lire la suite<span> Exploring the similarities of a large bank of protein pockets in a perspective of multiple protein-ligand interactions prediction<\/span><\/a><\/p>\n","protected":false},"author":560,"featured_media":2263,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"categories":[51,33,1,29],"tags":[],"class_list":["post-1532","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-51","category-biology","category-diip","category-masters-internship"],"_links":{"self":[{"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/posts\/1532","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/users\/560"}],"replies":[{"embeddable":true,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/comments?post=1532"}],"version-history":[{"count":8,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/posts\/1532\/revisions"}],"predecessor-version":[{"id":3100,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/posts\/1532\/revisions\/3100"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/media\/2263"}],"wp:attachment":[{"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/media?parent=1532"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/categories?post=1532"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/wordpress-test.app.u-pariscite.fr\/diip\/wp-json\/wp\/v2\/tags?post=1532"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}